ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 21.00 0.04 0.14 17.95 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 3089.00 6.30 20.46 100.0 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 286.00 0.58 1.89 24.47 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2915.00 5.94 19.31 67.12 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 346.00 0.71 2.29 94.02 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 5922.00 12.07 39.23 81.13 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 5041.00 10.27 33.39 75.79 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 4.00 0.01 0.03 100.0 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 10704.00 21.82 70.91 98.37 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 3.00 0.01 0.02 100.0 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 5978.00 12.18 39.60 90.98 EIF4A2-219 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 32.00 5.84 0.21 100.0 RPS8-207 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 1054.00 23.82 6.98 100.0 RPL7A-206 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 1.00 0.02 0.01 100.0 RPL7A-206 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 2258.00 51.03 14.96 100.0 RPL7A-206 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 1966.00 19.80 13.02 100.0 RPL21-209 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 1432.00 14.42 9.49 98.08 RPL21-209 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 307.00 3.09 2.03 100.0 RPL21-209 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 290.00 2.92 1.92 99.32 RPL21-209 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 2093.00 21.08 13.86 100.0 RPL21-209 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 2549.00 46.06 16.89 100.0 GABRE-209 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 1.00 0.01 0.01 100.0 RPL13A-212 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 1.00 0.01 0.01 50.0 RPL13A-212 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 138.00 1.22 0.91 100.0 RPL13A-212 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 11.00 0.10 0.07 100.0 RPL13A-212 retained intron trophoblast cell (In vitro differentiated cells)