ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 641.00 0.23 3.61 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 3265.56 1.19 18.37 66.12 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 464.00 0.17 2.61 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 2732.56 0.99 15.37 50.13 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1229.00 0.45 6.91 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 318.00 37.86 1.79 100.0 SNORD114-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 390.00 46.43 2.19 100.0 SNORD114-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 2262.00 25.35 12.72 100.0 Y_RNA.234-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 125.00 6.32 0.70 100.0 RNA5SP141-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 54.00 85.71 0.30 100.0 SNORD114-15-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 62.00 25.73 0.35 100.0 ENST00000364722 snoRNA upper lobe of left lung (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 107.00 70.39 0.60 100.0 SNORD113-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 2973.00 48.90 16.72 100.0 SNORD52-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 110.00 40.29 0.62 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 125.00 45.79 0.70 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 37.00 3.56 0.21 100.0 RNA5SP298-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 188.00 82.10 1.06 100.0 SNORD113-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 33508.00 88.22 188.49 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1984.00 5.22 11.16 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 296.00 0.78 1.67 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 922.00 88.48 5.19 98.29 SNORD114-20-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 244.00 9.25 1.37 78.21 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 62.00 2.35 0.35 25.94 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 44.00 1.67 0.25 100.0 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 397.00 15.05 2.23 85.38 7SK.1-201 misc RNA upper lobe of left lung (Tissue)