ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 4666.00 12.68 26.25 65.68 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 52.00 89.66 0.29 100.0 SNORD114-14-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 2207.00 4.12 12.41 100.0 SNORD104-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 62.00 0.12 0.35 100.0 SNORD104-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 154257.00 64.09 867.73 73.2 RNA5SP358-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 67.00 2.89 0.38 64.42 RNA5SP145-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 4.00 5.41 0.02 100.0 Y_RNA.105-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 4.00 2.11 0.02 100.0 RNY4P9-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1452.00 30.62 8.17 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 770.00 16.24 4.33 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 36.00 0.76 0.20 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 1.00 0.09 0.01 50.0 RNY4P27-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 46.00 4.14 0.26 97.87 RNY4P27-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 332.00 32.81 1.87 100.0 Y_RNA.136-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 1306.00 92.17 7.35 98.27 SNORD114-25-201 snoRNA upper lobe of left lung (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 198.00 95.65 1.11 100.0 SNORD113-7-201 snoRNA upper lobe of left lung (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 93.00 29.25 0.52 100.0 Y_RNA.181-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 9.00 0.21 0.05 100.0 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1143.00 26.95 6.43 100.0 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 702.64 16.57 3.95 70.12 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 229.22 5.40 1.29 35.16 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1229.00 0.45 6.91 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 641.00 0.23 3.61 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 5746.00 2.09 32.32 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 14465.61 5.25 81.37 39.81 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)