ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 619.00 0.01 3.48 96.72 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 42824.00 54.12 240.89 86.67 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 5412.00 97.74 30.44 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 3181.00 36.67 17.89 95.73 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 573.00 92.42 3.22 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 250451.00 85.43 1408.84 97.1 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 10.00 0.00 0.06 100.0 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 7631.38 32.33 42.93 58.64 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 4631.00 19.62 26.05 98.91 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 9453.50 40.05 53.18 55.99 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 608386.00 96.39 3422.31 99.49 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 766.00 23.83 4.31 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 3670.00 32.39 20.64 62.37 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 8.00 0.01 0.05 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 81.00 0.01 0.46 75.7 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 26624.00 91.15 149.77 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 38.00 0.47 0.21 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 152132.00 96.98 855.78 99.71 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 420.00 0.32 2.36 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 120845.00 92.17 679.78 97.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 50.00 13.66 0.28 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 4782.00 16.16 26.90 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 73.00 3.57 0.41 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 83825.00 98.43 471.54 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 945.00 94.69 5.32 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA upper lobe of left lung (Tissue)