ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 141.00 56.63 0.79 100.0 MIR374A-201 miRNA upper lobe of left lung (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 49.00 81.67 0.28 100.0 MIR31-201 miRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 47.00 0.02 0.26 81.03 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 346.60 0.12 1.95 51.96 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 1401.00 0.50 7.88 45.31 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 492.75 0.18 2.77 51.65 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1988.00 0.72 11.18 67.32 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 19.00 0.01 0.11 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 25.00 0.01 0.14 34.72 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 12.00 0.00 0.07 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 408.00 0.15 2.30 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 5941.00 2.14 33.42 77.84 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 38.00 0.01 0.21 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 453.00 39.53 2.55 100.0 Y_RNA.14-201 misc RNA upper lobe of left lung (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 2037.00 12.29 11.46 100.0 SNORA31-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 22.00 0.92 0.12 31.88 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 41.00 1.72 0.23 63.08 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 54.00 2.27 0.30 100.0 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 1044.68 2.84 5.88 52.71 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 3823.00 10.39 21.51 69.11 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 4666.00 12.68 26.25 65.68 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 4194.00 11.40 23.59 63.15 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1128.49 3.07 6.35 68.39 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 153.00 0.42 0.86 100.0 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 5844.00 15.88 32.87 71.57 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)