ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 5414.00 82.53 30.46 100.0 MIR140-201 miRNA upper lobe of left lung (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 497.00 37.23 2.80 57.39 MIR106B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 77.00 5.77 0.43 100.0 MIR106B-201 miRNA upper lobe of left lung (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 339.00 59.47 1.91 100.0 SNORD41-201 snoRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 24445.00 27.58 137.51 57.28 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 16963.00 19.14 95.42 100.0 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 208.00 0.23 1.17 2.26 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 6049.00 65.46 34.03 100.0 MT-TV-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 32.00 0.18 0.18 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 91.00 0.52 0.51 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1847.00 10.58 10.39 88.8 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1740.00 9.97 9.79 84.1 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 6.00 0.03 0.03 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 269.00 1.54 1.51 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 30.00 0.17 0.17 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 3706.00 71.16 20.85 98.15 MT-TI-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 118.00 2.27 0.66 100.0 MT-TI-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 111.00 0.23 0.62 100.0 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 20703.00 42.71 116.46 93.71 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 6083.13 12.55 34.22 43.05 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 11932.34 24.62 67.12 62.1 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 20525.00 17.27 115.46 100.0 MT-TM-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 92107.00 77.48 518.12 96.42 MT-TM-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 293.00 17.35 1.65 100.0 MT-TC-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 29563.00 22.56 166.30 100.0 MT-TY-201 Mt tRNA upper lobe of left lung (Tissue)