ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 143.00 2.12 0.82 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 294.00 0.42 1.68 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 39771.00 56.56 227.88 90.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 200.00 7.56 1.15 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 101.00 3.08 0.58 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 254.00 0.24 1.46 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 85.00 0.60 0.49 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 357.00 2.51 2.05 36.73 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 93.00 0.66 0.53 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 364.00 2.56 2.09 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1298.00 9.14 7.44 86.94 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 122.00 0.86 0.70 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 2668.00 15.25 15.29 63.3 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 4265.00 24.37 24.44 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 2083.00 13.74 11.94 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 7969.00 57.59 45.66 97.22 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 158.00 1.14 0.91 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 144.00 1.04 0.83 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 87.00 0.63 0.50 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 618.00 4.47 3.54 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1614.00 11.61 9.25 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 2366.00 23.19 13.56 90.79 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 394.00 3.32 2.26 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 104.00 3.90 0.60 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 110.00 4.13 0.63 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA stomach (Tissue)