ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 140.00 12.50 0.80 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 312.00 2.28 1.79 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 60.00 14.81 0.34 78.95 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 121.00 0.31 0.69 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3.00 7.32 0.02 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1172.00 7.12 6.72 86.3 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 683.00 4.15 3.91 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 7320.00 44.49 41.94 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 2363.00 39.34 13.54 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 183.00 0.26 1.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 899.00 1.27 5.15 64.08 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 206.00 0.29 1.18 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 2089.00 2.95 11.97 90.04 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 8791.00 12.43 50.37 43.35 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 50.00 0.07 0.29 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 100.00 42.74 0.57 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 248.00 0.07 1.42 98.02 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 138.00 8.00 0.79 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 291.00 16.86 1.67 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 91.00 4.43 0.52 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 256.00 1.84 1.47 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 116.00 0.03 0.66 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 305.00 0.09 1.75 15.13 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1728.00 21.13 9.90 67.71 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 1399.00 17.11 8.02 44.74 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA stomach (Tissue)