ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 480.00 74.07 2.75 100.0 B4GALT1-203 nonsense mediated decay stomach (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1159.00 4.99 6.64 100.0 ENST00000722183 lncRNA stomach (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 7663.00 33.01 43.91 91.92 ENST00000722183 lncRNA stomach (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 178.00 0.77 1.02 100.0 ENST00000722183 lncRNA stomach (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 7210.00 53.05 41.31 65.5 THBS3-AS1-228 lncRNA stomach (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 28137.00 64.40 161.22 100.0 MIR200CHG-202 lncRNA stomach (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 3119.00 7.14 17.87 100.0 MIR200CHG-202 lncRNA stomach (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 821.00 9.76 4.70 100.0 SNHG16-266 lncRNA stomach (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 3501.00 41.60 20.06 100.0 SNHG16-266 lncRNA stomach (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 268.00 3.18 1.54 100.0 SNHG16-266 lncRNA stomach (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 18.00 60.00 0.10 100.0 MEG8-261 lncRNA stomach (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 356.00 48.04 2.04 100.0 NR2F2-AS1-327 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 742.00 3.15 4.25 34.13 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 11168.00 47.34 63.99 100.0 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 941.00 3.99 5.39 55.91 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 491.00 2.08 2.81 39.82 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 5406.00 22.91 30.98 100.0 ENST00000747675 lncRNA stomach (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 25386.00 80.25 145.46 94.7 SNHG26-250 lncRNA stomach (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 878.00 2.78 5.03 100.0 SNHG26-250 lncRNA stomach (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 109.00 5.21 0.62 100.0 LINC02422-207 lncRNA stomach (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 642.00 10.70 3.68 100.0 ENST00000753088 lncRNA stomach (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 220.00 3.67 1.26 100.0 ENST00000753088 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 681.70 2.59 3.91 21.18 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 4048.00 15.37 23.19 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 599.00 2.27 3.43 100.0 ENST00000756336 lncRNA stomach (Tissue)