ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 125.00 0.14 0.72 100.0 MT-TY-201 Mt tRNA stomach (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 29924.00 33.93 171.46 90.26 MT-TY-201 Mt tRNA stomach (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 26.00 0.03 0.15 100.0 MT-TY-201 Mt tRNA stomach (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 35106.00 39.80 201.15 100.0 MT-TY-201 Mt tRNA stomach (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 23.00 15.54 0.13 100.0 MT-TD-201 Mt tRNA stomach (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 6019.00 27.01 34.49 100.0 MT-TK-201 Mt tRNA stomach (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 8489.00 38.09 48.64 100.0 MT-TK-201 Mt tRNA stomach (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 530.00 2.38 3.04 100.0 MT-TK-201 Mt tRNA stomach (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 208.00 0.93 1.19 100.0 MT-TK-201 Mt tRNA stomach (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 713.00 20.92 4.09 90.48 MT-TS2-201 Mt tRNA stomach (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 109.00 3.20 0.62 100.0 MT-TS2-201 Mt tRNA stomach (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 99.00 2.90 0.57 100.0 MT-TS2-201 Mt tRNA stomach (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 314.00 21.38 1.80 100.0 MT-TL2-201 Mt tRNA stomach (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 489.00 0.35 2.80 89.23 MT-TE-201 Mt tRNA stomach (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 59.00 0.04 0.34 14.18 MT-TE-201 Mt tRNA stomach (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 93861.00 67.50 537.81 89.93 MT-TE-201 Mt tRNA stomach (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 1865.00 1.34 10.69 100.0 MT-TE-201 Mt tRNA stomach (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 70.00 0.05 0.40 100.0 MT-TE-201 Mt tRNA stomach (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 3383.00 2.43 19.38 86.39 MT-TE-201 Mt tRNA stomach (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 9.00 64.29 0.05 100.0 MIR196A1-201 miRNA stomach (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1280.00 52.03 7.33 100.0 MT-RNR1-201 Mt rRNA stomach (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 160.00 76.19 0.92 100.0 MIR454-201 miRNA stomach (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 404.00 47.31 2.31 100.0 MIR501-201 miRNA stomach (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1936.00 91.88 11.09 100.0 MIR769-201 miRNA stomach (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 120.00 62.83 0.69 100.0 KRTAP19-1-201 protein coding stomach (Tissue)