ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 20.00 0.69 0.11 100.0 MIR106B-201 miRNA stomach (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1349.00 46.55 7.73 57.06 MIR106B-201 miRNA stomach (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 888.00 70.25 5.09 100.0 SNORD41-201 snoRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 259.00 11.88 1.48 57.43 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 21.00 0.96 0.12 14.38 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 26.00 1.19 0.15 100.0 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 909.00 21.06 5.21 100.0 MT-TV-201 Mt tRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 341.00 2.77 1.95 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1217.00 9.89 6.97 85.64 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 127.00 1.03 0.73 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1060.00 8.61 6.07 91.38 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 23.00 0.19 0.13 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 850.00 6.90 4.87 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 444.00 3.61 2.54 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 67.00 7.51 0.38 88.16 MT-TI-201 Mt tRNA stomach (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 204.00 22.87 1.17 100.0 MT-TI-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 52986.00 60.13 303.60 86.93 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 5143.45 5.84 29.47 52.66 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 9478.51 10.76 54.31 59.68 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 269.00 0.31 1.54 100.0 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 327.00 7.52 1.87 100.0 MT-TM-201 Mt tRNA stomach (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 1172.00 26.95 6.72 45.64 MT-TM-201 Mt tRNA stomach (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 151.00 23.27 0.87 100.0 MT-TC-201 Mt tRNA stomach (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 26.00 0.03 0.15 100.0 MT-TY-201 Mt tRNA stomach (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 35106.00 39.80 201.15 100.0 MT-TY-201 Mt tRNA stomach (Tissue)