ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 7634.00 84.94 37.17 97.24 SNORD114-20-201 snoRNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 14.00 0.69 0.07 26.42 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 153.00 7.52 0.75 61.94 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 87.00 4.28 0.42 100.0 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 288.00 14.15 1.40 88.34 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 223.00 10.96 1.09 85.44 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 1860.00 67.54 9.06 100.0 RNA5SP77-201 rRNA pseudogene spleen (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 27973.00 76.31 136.21 100.0 SNORD114-22-201 snoRNA spleen (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 7924.00 21.62 38.59 98.35 SNORD114-22-201 snoRNA spleen (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1036.00 4.60 5.04 100.0 SNORD6-201 snoRNA spleen (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 16838.00 74.72 81.99 100.0 SNORD6-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 14574.00 22.64 70.97 99.12 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 3820.00 5.93 18.60 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 532.00 0.83 2.59 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 2489.00 3.87 12.12 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 12192.00 18.94 59.37 92.73 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 9729.93 15.11 47.38 42.04 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 13534.94 21.02 65.91 58.48 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 55681.00 95.75 271.14 97.25 MIR146B-201 miRNA spleen (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 3613.00 88.95 17.59 100.0 SNHG20-201 lncRNA spleen (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 11.00 2.55 0.05 100.0 ATP5MK-205 protein coding spleen (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 59.00 13.66 0.29 100.0 ATP5MK-205 protein coding spleen (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 2.00 3.08 0.01 100.0 LINC01556-201 lncRNA spleen (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 443.00 49.78 2.16 100.0 ATAD3A-202 protein coding spleen (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 33.00 10.86 0.16 27.5 TMC5-202 protein coding spleen (Tissue)