ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 25713.00 66.20 125.21 94.25 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 12210.79 58.65 59.46 89.63 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 3899.17 18.73 18.99 33.53 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 2512.00 12.06 12.23 84.92 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 275215.00 91.32 1340.16 93.52 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 675.00 12.86 3.29 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 11972.00 38.09 58.30 57.78 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 114.00 0.07 0.56 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 416.00 0.08 2.03 63.9 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 5732.00 61.25 27.91 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 76.00 1.21 0.37 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 166573.00 96.84 811.13 99.65 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 129.00 0.30 0.63 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 25471.00 59.50 124.03 80.35 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 59.00 13.05 0.29 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 428.00 25.03 2.08 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 97.00 3.80 0.47 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 19104.00 95.56 93.03 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 937.00 87.00 4.56 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 24342.00 49.32 118.53 94.4 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 498.00 1.01 2.43 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 16.00 0.01 0.08 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 3542.00 58.23 17.25 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 420.00 3.30 2.05 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 21.00 1.26 0.10 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA spleen (Tissue)