ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 103.00 6.00 0.50 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 111.00 6.46 0.54 54.15 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 520.00 0.03 2.53 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 6642.00 61.98 32.34 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 3.00 1.05 0.01 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 765.00 10.48 3.73 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 6.00 0.08 0.03 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 167.00 43.38 0.81 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 233.00 50.54 1.13 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 49.00 7.89 0.24 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 55.00 0.11 0.27 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 169.00 0.34 0.82 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 139.00 0.28 0.68 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1102.00 2.19 5.37 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 557.00 1.11 2.71 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 14.00 0.03 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 1285.00 0.06 6.26 75.41 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 1201.00 0.06 5.85 59.99 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 1789.00 0.09 8.71 96.34 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 2735.00 21.05 13.32 80.11 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 2875.00 83.43 14.00 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 660.00 38.78 3.21 84.94 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 133.00 91.72 0.65 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 51.00 0.13 0.25 82.26 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 11.00 0.03 0.05 17.74 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA spleen (Tissue)