ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 40.00 0.65 0.19 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1419.00 0.26 6.91 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 328541.00 59.81 1599.83 83.08 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 485.00 25.01 2.36 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 12.00 0.76 0.06 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 163.00 0.32 0.79 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 169.00 0.74 0.82 21.47 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 151.00 0.66 0.74 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 72.00 0.32 0.35 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 141.00 0.62 0.69 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1652.00 7.25 8.04 98.8 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 374.00 1.64 1.82 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 13468.00 42.85 65.58 52.94 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 1140.00 3.63 5.55 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 627.00 2.04 3.05 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 86.00 0.52 0.42 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 9704.00 58.26 47.25 85.31 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 150.00 0.90 0.73 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 201.00 1.21 0.98 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 273.00 1.64 1.33 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 572.00 1.88 2.79 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 8786.00 45.03 42.78 80.95 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 118.00 0.40 0.57 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 237.00 13.80 1.15 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 161.00 9.38 0.78 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spleen (Tissue)