ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1779.61 14.61 8.67 60.59 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 401.07 3.29 1.95 16.23 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 312.00 2.56 1.52 80.0 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 566.95 4.65 2.76 24.88 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 2187.55 17.96 10.65 77.44 ENST00000823801 lncRNA spleen (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 565.00 64.35 2.75 78.8 ENST00000827714 lncRNA spleen (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 152.00 17.31 0.74 21.2 ENST00000827714 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 900.00 1.66 4.38 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 24.00 0.04 0.12 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 4271.00 7.88 20.80 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 47271.00 87.19 230.19 100.0 GAS5-377 lncRNA spleen (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 87.00 1.51 0.42 100.0 ZFAS1-238 lncRNA spleen (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 80.00 1.39 0.39 100.0 ZFAS1-238 lncRNA spleen (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2398.00 41.70 11.68 100.0 ZFAS1-238 lncRNA spleen (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 7.00 0.06 0.03 100.0 ZFAS1-242 lncRNA spleen (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 9896.00 90.83 48.19 100.0 ZFAS1-242 lncRNA spleen (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 678.00 26.60 3.30 100.0 ENST00000837997 lncRNA spleen (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1022.00 40.09 4.98 100.0 ENST00000837997 lncRNA spleen (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 2894.00 67.89 14.09 75.58 ENST00000839036 lncRNA spleen (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 27.00 12.80 0.13 100.0 ENST00000849527 lncRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 91463.00 89.27 445.38 95.84 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 14.00 0.01 0.07 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 33.00 0.02 0.16 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1849.00 62.59 9.00 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 507.00 17.16 2.47 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA spleen (Tissue)