ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 885264.00 56.08 4310.79 98.68 SNHG12-223 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 83536.00 73.02 406.78 100.0 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 252.00 0.22 1.23 39.38 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1032.00 0.90 5.03 100.0 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 948.96 0.83 4.62 44.8 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 761.56 0.67 3.71 40.57 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1330.09 1.16 6.48 41.83 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 8549.00 7.47 41.63 74.57 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 307.00 0.27 1.49 100.0 SNHG25-206 lncRNA spleen (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 8532.00 82.09 41.55 86.03 MIR155HG-205 lncRNA spleen (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 64.00 0.69 0.31 100.0 ENST00000785178 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 269.00 6.16 1.31 88.2 ENST00000786284 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1271.00 29.09 6.19 100.0 ENST00000786284 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 36.00 0.82 0.18 26.47 ENST00000786284 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 6569.51 32.63 31.99 50.13 ENST00000797550 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 7123.23 35.38 34.69 54.36 ENST00000797550 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 3536.00 17.56 17.22 86.84 ENST00000797550 lncRNA spleen (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 254398.00 78.80 1238.79 89.41 MIR181A1HG-212 lncRNA spleen (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 657.00 0.20 3.20 100.0 MIR181A1HG-212 lncRNA spleen (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 213.00 68.71 1.04 100.0 C19orf48P-218 lncRNA spleen (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 829.00 49.05 4.04 92.32 SNHG18-220 lncRNA spleen (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 683.00 18.40 3.33 100.0 ENST00000817026 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 34.00 0.28 0.17 100.0 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 595.08 4.88 2.90 24.55 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 257.85 2.12 1.26 48.2 ENST00000823279 lncRNA spleen (Tissue)