ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 4300.00 91.65 20.94 100.0 MEG8-228 lncRNA spleen (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 184.00 2.22 0.90 100.0 LIMD1-AS1-204 lncRNA spleen (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1593.00 19.26 7.76 92.89 LIMD1-AS1-204 lncRNA spleen (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 327.00 66.73 1.59 84.28 MIR99AHG-262 lncRNA spleen (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 30.00 6.12 0.15 100.0 MIR99AHG-262 lncRNA spleen (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 2.00 1.94 0.01 100.0 MIR9-2HG-225 lncRNA spleen (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 64.00 62.14 0.31 81.01 MIR9-2HG-225 lncRNA spleen (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 723.00 47.79 3.52 100.0 MEG8-233 lncRNA spleen (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 115.00 7.60 0.56 100.0 MEG8-233 lncRNA spleen (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 382.00 33.81 1.86 100.0 MEG8-234 lncRNA spleen (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 199.00 17.61 0.97 100.0 MEG8-234 lncRNA spleen (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 501.00 53.93 2.44 100.0 MEG8-240 lncRNA spleen (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 5.00 8.93 0.02 100.0 SNHG14-306 lncRNA spleen (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 5.00 0.48 0.02 100.0 ENST00000666735 lncRNA spleen (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 34.00 3.27 0.17 100.0 ENST00000666735 lncRNA spleen (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 914.00 74.73 4.45 100.0 MEG8-242 lncRNA spleen (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 190.00 0.55 0.93 100.0 MEG8-244 lncRNA spleen (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 441.00 1.27 2.15 100.0 MEG8-244 lncRNA spleen (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 32955.00 94.99 160.47 98.95 MEG8-244 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 2500.00 0.23 12.17 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 15.00 0.00 0.07 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 30624.00 2.76 149.12 98.97 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 878.33 0.08 4.28 66.84 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 3319.00 0.30 16.16 83.77 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 307210.00 27.70 1495.96 99.48 SNHG1-248 lncRNA spleen (Tissue)