ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 983.00 42.74 4.79 100.0 SNORD114-21-201 snoRNA spleen (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 8848.00 94.94 43.09 100.0 MIR98-201 miRNA spleen (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 101.00 44.30 0.49 100.0 SNORD113-5-201 snoRNA spleen (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 1078.00 90.21 5.25 100.0 MIR15A-201 miRNA spleen (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 7.00 58.33 0.03 100.0 MIR376C-201 miRNA spleen (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 755.00 42.42 3.68 100.0 SNHG21-206 retained intron spleen (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 252856.00 48.13 1231.28 97.69 MIR486-1-201 miRNA spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 20878.00 66.35 101.67 99.99 NOP56-219 retained intron spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 478.00 1.52 2.33 100.0 NOP56-219 retained intron spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 1639.00 5.21 7.98 100.0 NOP56-219 retained intron spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 2884.00 9.17 14.04 52.39 NOP56-219 retained intron spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 3970.53 31.73 19.33 45.5 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 2.00 0.02 0.01 100.0 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 552.00 4.41 2.69 100.0 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 4.00 0.03 0.02 100.0 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 4595.22 36.72 22.38 52.66 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 12.00 92.31 0.06 100.0 MIR7974-201 miRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1093.00 2.98 5.32 100.0 U2.3-201 snRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 51.00 0.14 0.25 28.65 U2.3-201 snRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 10.00 0.03 0.05 100.0 U2.3-201 snRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 4449.00 12.12 21.66 100.0 U2.3-201 snRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 975.00 2.66 4.75 100.0 U2.3-201 snRNA spleen (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 2264.00 6.76 11.02 100.0 U2.6-201 snRNA spleen (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 309.00 0.24 1.50 13.87 ENST00000619323 lncRNA spleen (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 124924.00 96.20 608.32 97.64 ENST00000619323 lncRNA spleen (Tissue)