ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 2811.00 69.34 11.44 97.47 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 34.00 0.84 0.14 100.0 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 777.00 19.17 3.16 100.0 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 45.00 2.51 0.18 100.0 RNA5SP298-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 148.00 57.59 0.60 100.0 SNORD115-38-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 587.00 60.52 2.39 100.0 SNORD115-10-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 503.00 80.74 2.05 100.0 SNORD113-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 39.00 32.23 0.16 100.0 SNORD115-20-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 340.00 1.92 1.38 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 12666.00 71.47 51.56 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 2991.00 16.88 12.18 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 6021.00 88.83 24.51 98.67 SNORD114-20-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 1.00 0.12 0.00 14.29 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 7.00 0.83 0.03 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 9.00 1.06 0.04 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 53.00 6.26 0.22 55.79 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 84.00 9.92 0.34 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 64.00 7.56 0.26 64.65 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 191.00 22.55 0.78 84.51 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 33.00 3.90 0.13 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 75.00 8.85 0.31 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 1236.00 66.63 5.03 100.0 SNORD14C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 156.00 64.46 0.64 100.0 SNORD115-44-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 470.00 52.28 1.91 100.0 RNA5SP77-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 7941.00 48.15 32.33 98.16 SNORD114-22-201 snoRNA esophagus muscularis mucosa (Tissue)