ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 454.00 62.28 1.85 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 85.00 11.66 0.35 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 68.00 19.54 0.28 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 229.00 5.21 0.93 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 328.00 37.53 1.34 78.66 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 84.00 0.19 0.34 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 314.00 15.05 1.28 90.23 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 1.00 0.05 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 403.00 19.31 1.64 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1411.00 50.14 5.74 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 1381.00 1.28 5.62 83.8 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 260.00 0.24 1.06 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 158.00 0.15 0.64 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 231.00 0.21 0.94 93.15 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 21904.00 20.29 89.16 48.76 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 852.00 0.79 3.47 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 37.00 0.03 0.15 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 39.00 33.05 0.16 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 242.00 0.17 0.99 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 54.00 11.56 0.22 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 70.00 14.99 0.28 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 46.00 8.01 0.19 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 66.00 0.59 0.27 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 111.00 0.08 0.45 27.48 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 222.00 0.15 0.90 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus muscularis mucosa (Tissue)