ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 780.00 70.72 3.18 100.0 SNORD115-40-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 8631.00 97.80 35.13 100.0 MIR98-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 1167.00 91.31 4.75 100.0 SNORD113-5-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 248.00 90.84 1.01 100.0 MIR15A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 728.00 59.62 2.96 100.0 SNHG21-206 retained intron esophagus muscularis mucosa (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 553.00 91.71 2.25 100.0 SNORD11B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 3332.00 65.12 13.56 100.0 SNORD91B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 10470.00 31.02 42.62 33.82 SNORD91A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 415556.00 48.74 1691.58 98.06 MIR486-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 47069.00 59.72 191.60 68.32 NOP56-219 retained intron esophagus muscularis mucosa (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 307.00 0.39 1.25 100.0 NOP56-219 retained intron esophagus muscularis mucosa (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 582.00 0.74 2.37 100.0 NOP56-219 retained intron esophagus muscularis mucosa (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 4197.00 5.33 17.08 71.51 NOP56-219 retained intron esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 534.00 0.89 2.17 40.89 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 21733.26 36.35 88.47 46.88 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 30.00 0.05 0.12 100.0 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 1324.00 2.21 5.39 100.0 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 25.00 0.04 0.10 100.0 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1307.00 2.19 5.32 70.99 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 25598.37 42.82 104.20 55.22 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 1.00 25.00 0.00 100.0 MIR376A1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 189.00 1.05 0.77 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 955.83 5.29 3.89 28.54 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 462.00 2.56 1.88 96.05 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 4.00 0.02 0.02 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)