ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 18511.00 18.69 75.35 59.88 RACK1-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 78624.00 79.36 320.05 94.69 RACK1-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 211.00 2.66 0.86 100.0 RNA5SP486-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 3306.00 90.11 13.46 100.0 SCARNA5-201 scaRNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 632.00 0.33 2.57 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 89023.00 46.62 362.38 97.54 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 10516.00 5.51 42.81 82.41 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 812.00 0.43 3.31 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 1779.00 0.93 7.24 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 472.00 0.25 1.92 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 32336.00 16.93 131.63 98.35 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 1048.00 0.55 4.27 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2225.00 1.17 9.06 69.04 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 465.00 0.24 1.89 67.98 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 16493.00 8.64 67.14 100.0 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 6213.00 3.25 25.29 78.93 RNY4-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 507.00 70.22 2.06 77.64 MIR3142HG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 3801.00 89.99 15.47 100.0 SNHG6-204 retained intron esophagus muscularis mucosa (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 4971.00 11.73 20.24 100.0 MIR151A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 31860.00 75.16 129.69 87.08 MIR151A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 813.00 99.88 3.31 100.0 DENND3-221 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 287.00 1.47 1.17 100.0 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 126.00 0.64 0.51 45.16 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 820.00 4.19 3.34 68.22 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 153.00 0.78 0.62 54.84 WDR74-204 protein coding esophagus muscularis mucosa (Tissue)