ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 146.00 79.35 0.59 100.0 MIR454-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 390.00 72.49 1.59 100.0 MIR501-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 770.00 88.81 3.13 100.0 MIR769-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 134.00 74.03 0.55 100.0 KRTAP19-1-201 protein coding esophagus muscularis mucosa (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 14.00 9.72 0.06 100.0 MIR708-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 21.00 95.45 0.09 100.0 MIR509-3-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 2.00 100.00 0.01 100.0 MIR301B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 159.00 25.36 0.65 77.56 RNU1-82P-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1584.00 10.03 6.45 100.0 SNORD66-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 350.00 2.22 1.42 100.0 SNORD66-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 5072.00 32.10 20.65 74.32 SNORD66-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 2048.00 12.96 8.34 100.0 SNORD66-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 47.00 72.31 0.19 100.0 U3.17-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1752.00 91.39 7.13 100.0 SNORD17-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 263.00 70.89 1.07 100.0 SNORD72-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1250.00 67.75 5.09 100.0 SNORD70B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 3434.00 59.88 13.98 92.74 RNY4P18-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 43799.00 89.94 178.29 100.0 SNORD90-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 2888.00 5.93 11.76 54.62 SNORD90-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 17435.00 59.46 70.97 100.0 SNORD69-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 5347.00 18.24 21.77 100.0 SNORD69-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 3618.00 12.34 14.73 100.0 SNORD69-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 484.00 1.65 1.97 100.0 SNORD69-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1838.00 51.89 7.48 57.53 SNORD70-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 25103.00 86.18 102.19 90.97 B4GALNT2-202 protein coding esophagus muscularis mucosa (Tissue)