ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 251.00 0.46 0.91 33.2 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 920.00 1.68 3.35 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 817.14 1.49 2.97 42.76 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 722.20 1.32 2.63 42.91 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1134.56 2.08 4.13 40.45 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 12233.00 22.38 44.50 82.27 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 367.00 0.67 1.33 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 679.00 79.51 2.47 82.4 MIR155HG-205 lncRNA sigmoid colon (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 43.00 63.24 0.16 100.0 ENST00000784740 lncRNA sigmoid colon (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 68.00 3.02 0.25 100.0 ENST00000785178 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 416.00 6.84 1.51 83.7 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1792.00 29.48 6.52 100.0 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 81.00 1.33 0.29 19.38 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3224.77 42.18 11.73 57.26 ENST00000797550 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2374.17 31.05 8.64 42.15 ENST00000797550 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 617.00 8.07 2.24 74.7 ENST00000797550 lncRNA sigmoid colon (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 67482.00 86.71 245.46 93.68 MIR181A1HG-212 lncRNA sigmoid colon (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 69.00 0.09 0.25 100.0 MIR181A1HG-212 lncRNA sigmoid colon (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 40.00 78.43 0.15 100.0 C19orf48P-218 lncRNA sigmoid colon (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 2117.00 73.28 7.70 93.1 SNHG18-220 lncRNA sigmoid colon (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 235.00 23.41 0.85 100.0 ENST00000817026 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 41.00 0.74 0.15 100.0 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 242.58 4.36 0.88 45.0 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 169.91 3.06 0.62 34.96 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 511.47 9.20 1.86 46.37 ENST00000823279 lncRNA sigmoid colon (Tissue)