ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 3621.69 15.28 13.17 68.42 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1331.46 5.62 4.84 30.66 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 240.29 1.01 0.87 52.81 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 10.00 0.04 0.04 100.0 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 4652.94 19.63 16.92 80.07 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 17.00 8.59 0.06 100.0 ENST00000756452 lncRNA sigmoid colon (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 2119.00 51.12 7.71 100.0 ENST00000760093 lncRNA sigmoid colon (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 388.00 9.36 1.41 100.0 ENST00000760093 lncRNA sigmoid colon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 5163.00 24.32 18.78 87.07 LINC02806-241 lncRNA sigmoid colon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 237.00 1.12 0.86 100.0 LINC02806-241 lncRNA sigmoid colon (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 43.00 0.20 0.16 100.0 LINC02806-241 lncRNA sigmoid colon (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 7055.00 33.23 25.66 79.37 LINC02806-241 lncRNA sigmoid colon (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1272.00 96.29 4.63 100.0 EHBP1-AS1-210 lncRNA sigmoid colon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 279.00 19.86 1.01 100.0 ENST00000770398 lncRNA sigmoid colon (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 408.00 29.04 1.48 100.0 ENST00000770398 lncRNA sigmoid colon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 314.00 22.35 1.14 100.0 ENST00000770398 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 281.00 1.25 1.02 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 70.00 0.31 0.25 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 19129.00 85.29 69.58 97.04 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 293.00 1.31 1.07 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 11.00 2.49 0.04 100.0 ENST00000772672 lncRNA sigmoid colon (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 235.00 26.46 0.85 100.0 ENST00000773843 lncRNA sigmoid colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 304668.00 50.97 1108.19 91.89 SNHG12-223 lncRNA sigmoid colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 291529.00 48.77 1060.40 98.72 SNHG12-223 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 25552.00 46.74 92.94 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)