ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 497.00 2.56 2.62 84.67 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 32277.00 97.10 169.90 100.0 SNORD37-201 snoRNA transverse colon (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 78280.00 91.12 412.04 97.92 SNORD59A-201 snoRNA transverse colon (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 7.00 2.46 0.04 100.0 SNORA7B-201 snoRNA transverse colon (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 100.00 71.94 0.53 100.0 SNORD14D-201 snoRNA transverse colon (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 51.00 18.21 0.27 100.0 Y_RNA.555-201 misc RNA transverse colon (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 7415.00 90.50 39.03 92.07 MIR25-201 miRNA transverse colon (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 8758.00 87.70 46.10 96.52 MIR99B-201 miRNA transverse colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 4119.00 42.43 21.68 82.63 MIR23B-201 miRNA transverse colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 5188.00 53.45 27.31 78.94 MIR23B-201 miRNA transverse colon (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 1535.00 81.48 8.08 100.0 MIR203A-201 miRNA transverse colon (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 5132.00 84.06 27.01 90.35 MIR199B-201 miRNA transverse colon (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 230.00 3.77 1.21 100.0 MIR199B-201 miRNA transverse colon (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 2047.00 94.42 10.77 100.0 MIR30B-201 miRNA transverse colon (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1256.00 94.44 6.61 100.0 MIR181D-201 miRNA transverse colon (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 10572.00 94.85 55.65 100.0 MIR215-201 miRNA transverse colon (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 657.00 0.35 3.46 100.0 MIR181A2-201 miRNA transverse colon (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 68943.00 99.14 362.89 99.73 MIR191-201 miRNA transverse colon (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 38.00 84.44 0.20 88.37 MIR149-201 miRNA transverse colon (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1619.00 90.14 8.52 98.9 MIR181C-201 miRNA transverse colon (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 91.00 5.07 0.48 100.0 MIR181C-201 miRNA transverse colon (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 7610.00 73.96 40.06 100.0 MIR194-1-201 miRNA transverse colon (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 139.00 81.29 0.73 81.76 MIR128-2-201 miRNA transverse colon (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 577.00 73.60 3.04 89.88 MIR99A-201 miRNA transverse colon (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1983.00 2.13 10.44 89.89 MIR28-201 miRNA transverse colon (Tissue)