ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 1748.00 73.35 9.20 97.65 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 7.00 0.29 0.04 100.0 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 416.00 17.46 2.19 100.0 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 20.00 1.58 0.11 100.0 RNA5SP298-201 rRNA pseudogene transverse colon (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 20.00 64.52 0.11 100.0 SNORD115-38-201 snoRNA transverse colon (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 74.00 57.36 0.39 100.0 SNORD115-10-201 snoRNA transverse colon (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 489.00 85.19 2.57 100.0 SNORD113-9-201 snoRNA transverse colon (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 8.00 40.00 0.04 100.0 SNORD115-20-201 snoRNA transverse colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 426.00 2.66 2.24 100.0 SNORD38A-201 snoRNA transverse colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 13180.00 82.18 69.38 100.0 SNORD38A-201 snoRNA transverse colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1291.00 8.05 6.80 100.0 SNORD38A-201 snoRNA transverse colon (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 2928.00 88.46 15.41 97.05 SNORD114-20-201 snoRNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 9.00 0.49 0.05 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 11.00 0.60 0.06 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 21.00 1.14 0.11 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 72.00 3.90 0.38 74.23 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 38.00 2.06 0.20 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 45.00 2.44 0.24 60.81 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 112.00 6.06 0.59 79.43 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 262.00 14.19 1.38 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 21.00 1.14 0.11 100.0 7SK.1-201 misc RNA transverse colon (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 38.00 44.71 0.20 100.0 SNORD14C-201 snoRNA transverse colon (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 12.00 50.00 0.06 100.0 SNORD115-44-201 snoRNA transverse colon (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 112.00 10.19 0.59 100.0 RNA5SP77-201 rRNA pseudogene transverse colon (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 3653.00 44.99 19.23 98.49 SNORD114-22-201 snoRNA transverse colon (Tissue)