ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1306.00 6.84 6.87 100.0 SNORD104-201 snoRNA transverse colon (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 174.00 78.03 0.92 91.1 SNORD115-9-201 snoRNA transverse colon (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 99983.00 66.27 526.28 73.67 RNA5SP358-201 rRNA pseudogene transverse colon (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 24.00 0.70 0.13 54.55 RNA5SP145-201 rRNA pseudogene transverse colon (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 3.00 60.00 0.02 100.0 Y_RNA.105-201 misc RNA transverse colon (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 12.00 2.75 0.06 100.0 RNY4P9-201 misc RNA transverse colon (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 44.00 1.01 0.23 100.0 RNU5B-1-201 snRNA transverse colon (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 941.00 21.52 4.95 100.0 RNU5B-1-201 snRNA transverse colon (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 435.00 9.95 2.29 100.0 RNU5B-1-201 snRNA transverse colon (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 1788.00 93.37 9.41 97.81 SNORD115-18-201 snoRNA transverse colon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 7.00 0.26 0.04 87.5 RNY4P27-201 misc RNA transverse colon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 66.00 2.42 0.35 98.51 RNY4P27-201 misc RNA transverse colon (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 118.00 17.74 0.62 100.0 Y_RNA.136-201 misc RNA transverse colon (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 104.00 85.25 0.55 100.0 SNORD115-41-201 snoRNA transverse colon (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 3.00 8.82 0.02 100.0 SNORD115-5-201 snoRNA transverse colon (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 7075.00 96.26 37.24 99.21 SNORD114-25-201 snoRNA transverse colon (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1229.00 86.92 6.47 100.0 SNORD113-7-201 snoRNA transverse colon (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 22.00 62.86 0.12 100.0 SNORD115-8-201 snoRNA transverse colon (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 40.00 24.54 0.21 100.0 Y_RNA.181-201 misc RNA transverse colon (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 22.00 53.66 0.12 100.0 SNORD115-16-201 snoRNA transverse colon (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 2.00 16.67 0.01 100.0 SNORD115-32-201 snoRNA transverse colon (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 5.00 35.71 0.03 100.0 SNORD115-30-201 snoRNA transverse colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 476.22 21.84 2.51 77.43 RNY1-201 misc RNA transverse colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 98.34 4.51 0.52 21.29 RNY1-201 misc RNA transverse colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 17.00 0.78 0.09 100.0 RNY1-201 misc RNA transverse colon (Tissue)