ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 46.00 75.41 0.24 100.0 ENST00000784740 lncRNA transverse colon (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 18.00 0.25 0.09 100.0 ENST00000785178 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 61.00 4.36 0.32 44.2 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 362.00 25.88 1.91 100.0 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 77.00 5.50 0.41 59.69 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 222.00 9.89 1.17 88.8 ENST00000788343 lncRNA transverse colon (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3148.74 9.11 16.57 55.04 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2882.24 8.34 15.17 50.38 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 16595.00 48.04 87.35 72.82 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 167561.00 80.25 881.99 91.2 MIR181A1HG-212 lncRNA transverse colon (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 178.00 0.09 0.94 100.0 MIR181A1HG-212 lncRNA transverse colon (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 46.00 13.03 0.24 100.0 C19orf48P-218 lncRNA transverse colon (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 159.00 45.04 0.84 100.0 C19orf48P-218 lncRNA transverse colon (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 6719.00 77.13 35.37 97.22 SNHG18-220 lncRNA transverse colon (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 65.00 5.94 0.34 100.0 ENST00000817026 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 574.56 4.37 3.02 21.05 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 47.00 0.36 0.25 100.0 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 78.25 0.59 0.41 44.97 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 23.00 0.17 0.12 100.0 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 1410.00 10.72 7.42 99.09 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1668.73 12.68 8.78 58.0 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 118.08 0.90 0.62 5.37 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 193.00 1.47 1.02 75.69 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 716.63 5.45 3.77 34.45 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1690.61 12.85 8.90 80.35 ENST00000823801 lncRNA transverse colon (Tissue)