ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 135.00 57.94 0.71 100.0 MEG8-240 lncRNA transverse colon (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 434.00 31.11 2.28 100.0 SNHG14-303 lncRNA transverse colon (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 2.00 3.33 0.01 100.0 SNHG14-306 lncRNA transverse colon (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 41.00 68.33 0.22 100.0 SNHG14-306 lncRNA transverse colon (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 84.00 4.79 0.44 100.0 ENST00000666735 lncRNA transverse colon (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 143.00 8.15 0.75 100.0 ENST00000666735 lncRNA transverse colon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 558.00 75.20 2.94 100.0 MEG8-242 lncRNA transverse colon (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 53.58 12.34 0.28 47.41 SNHG14-312 lncRNA transverse colon (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 47.38 10.92 0.25 41.93 SNHG14-312 lncRNA transverse colon (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 1.00 0.23 0.01 100.0 SNHG14-312 lncRNA transverse colon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 108.00 0.42 0.57 100.0 MEG8-244 lncRNA transverse colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 440.00 1.70 2.32 100.0 MEG8-244 lncRNA transverse colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 24718.00 95.67 130.11 99.84 MEG8-244 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 2281.00 0.85 12.01 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 4934.00 1.83 25.97 97.64 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 644.39 0.24 3.39 54.11 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 594.00 0.22 3.13 85.59 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 19356.00 7.20 101.88 99.5 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 380.00 0.14 2.00 77.71 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 46595.00 17.32 245.26 99.29 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 16289.00 6.06 85.74 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 25973.00 9.65 136.71 99.82 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 129.00 0.05 0.68 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 44.00 0.02 0.23 100.0 SNHG1-248 lncRNA transverse colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1729.00 0.64 9.10 100.0 SNHG1-248 lncRNA transverse colon (Tissue)