ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 19511.00 80.63 102.70 93.48 MIR30D-201 miRNA transverse colon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 2771.00 11.45 14.59 67.06 MIR30D-201 miRNA transverse colon (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 2282.00 56.89 12.01 100.0 MIR126-201 miRNA transverse colon (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1633.00 40.71 8.60 97.09 MIR126-201 miRNA transverse colon (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 18.00 38.30 0.09 100.0 MIR374A-201 miRNA transverse colon (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 20.00 90.91 0.11 100.0 MIR31-201 miRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 222.00 0.10 1.17 57.07 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 62.00 0.03 0.33 100.0 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 27.00 0.01 0.14 22.13 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 21.00 0.01 0.11 100.0 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 133.12 0.06 0.70 43.36 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 16.00 0.01 0.08 33.33 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 258.00 0.12 1.36 49.05 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 54.00 0.03 0.28 58.06 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 149.59 0.07 0.79 37.03 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 260.07 0.12 1.37 62.22 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 317.00 0.15 1.67 43.31 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 76.00 0.04 0.40 67.86 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 372.61 0.17 1.96 58.96 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 155.00 0.07 0.82 82.89 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 22.00 0.01 0.12 100.0 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 378.00 0.18 1.99 82.71 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 314.00 0.15 1.65 84.41 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 1677.00 0.78 8.83 80.16 RNA5S12-201 rRNA transverse colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 40798.00 18.97 214.75 99.86 RNA5S12-201 rRNA transverse colon (Tissue)