ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1390.00 46.33 7.32 100.0 MT-RNR1-201 Mt rRNA transverse colon (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 23.00 0.77 0.12 100.0 MT-RNR1-201 Mt rRNA transverse colon (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 37.00 77.08 0.19 100.0 MIR454-201 miRNA transverse colon (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 65.00 38.69 0.34 100.0 MIR501-201 miRNA transverse colon (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1287.00 89.00 6.77 100.0 MIR769-201 miRNA transverse colon (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 47.00 77.05 0.25 100.0 KRTAP19-1-201 protein coding transverse colon (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 11.00 35.48 0.06 100.0 MIR708-201 miRNA transverse colon (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 1.00 50.00 0.01 100.0 MIR543-201 miRNA transverse colon (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 4.00 80.00 0.02 100.0 MIR301B-201 miRNA transverse colon (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 193.00 32.17 1.02 69.68 RNU1-82P-201 snRNA transverse colon (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4079.00 39.46 21.47 74.24 SNORD66-201 snoRNA transverse colon (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 114.00 1.10 0.60 100.0 SNORD66-201 snoRNA transverse colon (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 703.00 6.80 3.70 100.0 SNORD66-201 snoRNA transverse colon (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 820.00 7.93 4.32 100.0 SNORD66-201 snoRNA transverse colon (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 103.00 20.04 0.54 100.0 U3.17-201 snoRNA transverse colon (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1957.00 89.57 10.30 100.0 SNORD17-201 snoRNA transverse colon (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 274.00 64.32 1.44 100.0 SNORD72-201 snoRNA transverse colon (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 241.00 80.60 1.27 100.0 SNORD70B-201 snoRNA transverse colon (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 8585.00 68.41 45.19 93.87 RNY4P18-201 misc RNA transverse colon (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 26137.00 87.20 137.58 100.0 SNORD90-201 snoRNA transverse colon (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 2325.00 7.76 12.24 63.49 SNORD90-201 snoRNA transverse colon (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 11171.00 63.33 58.80 100.0 SNORD69-201 snoRNA transverse colon (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2138.00 12.12 11.25 100.0 SNORD69-201 snoRNA transverse colon (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1790.00 10.15 9.42 100.0 SNORD69-201 snoRNA transverse colon (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 557.00 3.16 2.93 100.0 SNORD69-201 snoRNA transverse colon (Tissue)