ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 21.00 2.15 0.16 100.0 MIR500A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 765.00 78.30 5.66 100.0 MIR500A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 1866.00 0.78 13.80 100.0 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 47061.00 19.60 348.13 84.99 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 172350.00 71.76 1274.94 95.4 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 7873.00 3.28 58.24 100.0 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 383.00 0.57 2.83 100.0 MIR27B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 62139.00 92.22 459.67 95.44 MIR27B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 33.00 82.50 0.24 100.0 MIR196A2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 5.00 55.56 0.04 100.0 MIR577-201 miRNA upper lobe of left lung (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 14.00 63.64 0.10 70.0 MIR654-201 miRNA upper lobe of left lung (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 136.00 95.77 1.01 99.27 MIR204-201 miRNA upper lobe of left lung (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 977.00 92.43 7.23 100.0 MIR152-201 miRNA upper lobe of left lung (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 27.00 43.55 0.20 100.0 MIR138-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 2722.00 89.92 20.14 100.0 MIR30C1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 112.00 75.68 0.83 100.0 MIR660-201 miRNA upper lobe of left lung (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 162.00 5.10 1.20 100.0 MIR125B1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 2298.00 72.38 17.00 83.5 MIR125B1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 3.00 37.50 0.02 100.0 MIR493-201 miRNA upper lobe of left lung (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 5.00 62.50 0.04 100.0 MIR493-201 miRNA upper lobe of left lung (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 35242.35 50.78 260.70 54.48 MIR182-201 miRNA upper lobe of left lung (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 19288.10 27.79 142.68 32.44 MIR182-201 miRNA upper lobe of left lung (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 11463.00 88.94 84.80 91.91 MIR100-201 miRNA upper lobe of left lung (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 199.00 92.99 1.47 100.0 MIR301A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 674.00 5.50 4.99 37.34 MIR130A-201 miRNA upper lobe of left lung (Tissue)