ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 674.00 5.50 4.99 37.34 MIR130A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 348763.00 97.67 2579.94 98.33 MIRLET7F2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 538.00 73.90 3.98 100.0 MIR652-201 miRNA upper lobe of left lung (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 2.00 33.33 0.01 100.0 MIR653-201 miRNA upper lobe of left lung (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 3246.00 78.41 24.01 100.0 MIR140-201 miRNA upper lobe of left lung (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 443.00 37.20 3.28 56.36 MIR106B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 32.00 2.69 0.24 100.0 MIR106B-201 miRNA upper lobe of left lung (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 909.00 67.04 6.72 100.0 SNORD41-201 snoRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 801.00 2.73 5.93 25.53 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 6851.00 23.36 50.68 100.0 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 6076.00 20.72 44.95 72.3 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 3229.00 61.99 23.89 100.0 MT-TV-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 38.00 0.30 0.28 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 38.00 0.30 0.28 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1270.00 10.07 9.39 87.11 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1030.00 8.17 7.62 85.69 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 24.00 0.19 0.18 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 163.00 1.29 1.21 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 165.00 1.31 1.22 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 2052.00 62.69 15.18 97.25 MT-TI-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 289.00 8.83 2.14 100.0 MT-TI-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 10061.65 28.48 74.43 69.67 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 92.00 0.26 0.68 100.0 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 13966.00 39.52 103.31 88.27 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 3503.01 9.91 25.91 43.88 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)