ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 40.00 60.61 0.30 100.0 MIR194-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 173.00 73.93 1.28 80.84 MIR128-2-201 miRNA upper lobe of left lung (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 800.00 74.49 5.92 83.33 MIR99A-201 miRNA upper lobe of left lung (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 419.00 0.53 3.10 76.88 MIR28-201 miRNA upper lobe of left lung (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 70468.00 89.94 521.28 93.09 MIR28-201 miRNA upper lobe of left lung (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 1178.00 1.50 8.71 100.0 MIR28-201 miRNA upper lobe of left lung (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 410.00 63.27 3.03 100.0 MIR183-201 miRNA upper lobe of left lung (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 218.00 5.01 1.61 100.0 MIR145-201 miRNA upper lobe of left lung (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 3530.00 81.07 26.11 100.0 MIR145-201 miRNA upper lobe of left lung (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 9594.00 97.29 70.97 98.73 MIR186-201 miRNA upper lobe of left lung (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 594.00 78.68 4.39 100.0 MIR200B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 95.00 29.69 0.70 100.0 MIR218-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 27601.00 89.37 204.18 94.69 MIR181B2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 153042.00 88.55 1132.11 89.24 MIR10B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 197.90 59.43 1.46 64.67 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 16.00 4.80 0.12 100.0 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 65.42 19.65 0.48 38.94 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 943.00 17.45 6.98 100.0 MIR199A1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 3.00 100.00 0.02 100.0 MIR487B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 502.69 30.28 3.72 35.68 MIR93-201 miRNA upper lobe of left lung (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 1076.08 64.82 7.96 66.88 MIR93-201 miRNA upper lobe of left lung (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 1568.00 81.45 11.60 89.55 MIR532-201 miRNA upper lobe of left lung (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 341.00 90.93 2.52 100.0 MIR15B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 2965.00 82.45 21.93 100.0 MIR150-201 miRNA upper lobe of left lung (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 31.00 56.36 0.23 100.0 MIR542-201 miRNA upper lobe of left lung (Tissue)