ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 101.00 4.39 0.75 100.0 RNVU1-7-201 snRNA upper lobe of left lung (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 245.00 74.02 1.81 100.0 Y_RNA.389-201 misc RNA upper lobe of left lung (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 78459.00 87.04 580.39 98.94 SNORD101-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 530.00 0.59 3.92 100.0 SNORD101-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 1190.00 1.32 8.80 100.0 SNORD101-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 81539.00 96.95 603.18 100.0 SNORD37-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 32286.00 94.71 238.83 100.0 SNORD59A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 479.00 53.94 3.54 100.0 SNORA7B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 72.00 21.82 0.53 100.0 Y_RNA.555-201 misc RNA upper lobe of left lung (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 16266.00 91.61 120.33 92.96 MIR25-201 miRNA upper lobe of left lung (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 23552.00 87.61 174.22 93.71 MIR99B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 3648.00 47.70 26.99 90.23 MIR23B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 3391.00 44.34 25.08 77.74 MIR23B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 2581.00 78.07 19.09 100.0 MIR203A-201 miRNA upper lobe of left lung (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 256.00 5.51 1.89 100.0 MIR199B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 3679.00 79.15 27.21 87.16 MIR199B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 10656.00 95.72 78.83 100.0 MIR30B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1034.00 92.90 7.65 100.0 MIR181D-201 miRNA upper lobe of left lung (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 41.00 85.42 0.30 100.0 MIR508-201 miRNA upper lobe of left lung (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 24.00 85.71 0.18 100.0 MIR215-201 miRNA upper lobe of left lung (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 823.00 0.11 6.09 100.0 MIR181A2-201 miRNA upper lobe of left lung (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 67157.00 97.91 496.79 98.96 MIR191-201 miRNA upper lobe of left lung (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 11.00 45.83 0.08 64.71 MIR149-201 miRNA upper lobe of left lung (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 2367.00 94.30 17.51 99.66 MIR181C-201 miRNA upper lobe of left lung (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 52.00 2.07 0.38 100.0 MIR181C-201 miRNA upper lobe of left lung (Tissue)