ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 3293.00 63.35 24.36 88.57 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 61.00 0.05 0.45 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 5.00 18.52 0.04 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 7783.00 27.34 57.57 86.35 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 369.00 1.30 2.73 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 2010.00 7.06 14.87 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 401.00 20.64 2.97 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 256.00 0.05 1.89 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 5686.00 1.20 42.06 83.43 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 276.00 0.06 2.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 2009.00 0.42 14.86 92.75 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 69554.00 14.69 514.52 44.89 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 6.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 186.00 0.04 1.38 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 283.00 71.65 2.09 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 631.00 0.13 4.67 98.44 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 169.00 10.89 1.25 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 352.00 22.68 2.60 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 144.00 7.84 1.07 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 335.00 2.54 2.48 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 78.00 0.02 0.58 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 291.00 0.06 2.15 23.74 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 2573.00 31.00 19.03 65.64 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 2024.00 24.39 14.97 44.03 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 112.00 1.77 0.83 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA upper lobe of left lung (Tissue)