ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 465.77 9.84 3.45 42.19 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 989.65 20.91 7.32 77.68 ENST00000823801 lncRNA upper lobe of left lung (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 475.00 62.50 3.51 81.9 ENST00000827714 lncRNA upper lobe of left lung (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 105.00 13.82 0.78 18.1 ENST00000827714 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 613.00 1.46 4.53 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 13.00 0.03 0.10 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2675.00 6.38 19.79 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 37414.00 89.25 276.77 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 113.00 88.28 0.84 100.0 MIR205HG-245 lncRNA upper lobe of left lung (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 80.00 15.53 0.59 100.0 TAF12-DT-204 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 71.00 1.71 0.53 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 38.00 0.92 0.28 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1779.00 42.93 13.16 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 7873.00 92.30 58.24 100.0 ZFAS1-242 lncRNA upper lobe of left lung (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 580.00 29.23 4.29 100.0 ENST00000837997 lncRNA upper lobe of left lung (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 689.00 34.73 5.10 100.0 ENST00000837997 lncRNA upper lobe of left lung (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 6564.00 73.32 48.56 81.48 ENST00000839036 lncRNA upper lobe of left lung (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 52.00 9.74 0.38 100.0 ENST00000849527 lncRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 29489.00 88.77 218.14 97.04 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 68.00 0.20 0.50 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 42.00 0.03 0.31 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 649.00 49.62 4.80 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 261.00 19.95 1.93 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 298.00 19.38 2.20 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 423.00 7.63 3.13 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA upper lobe of left lung (Tissue)