ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 2111.31 1.74 15.62 41.36 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 2401.05 1.98 17.76 45.57 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 3541.67 2.92 26.20 43.36 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 27401.00 22.61 202.70 88.47 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 690.00 0.57 5.10 100.0 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 3366.00 82.70 24.90 87.09 MIR155HG-205 lncRNA upper lobe of left lung (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 4.00 66.67 0.03 100.0 ENST00000784740 lncRNA upper lobe of left lung (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 396.00 5.44 2.93 100.0 ENST00000785178 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 110.00 5.30 0.81 77.46 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 737.00 35.54 5.45 100.0 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 32.00 1.54 0.24 26.67 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 4312.09 31.91 31.90 61.6 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 3673.62 27.19 27.18 52.48 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 2654.00 19.64 19.63 58.28 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 666780.00 87.77 4932.43 92.77 MIR181A1HG-212 lncRNA upper lobe of left lung (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 835.00 0.11 6.18 100.0 MIR181A1HG-212 lncRNA upper lobe of left lung (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 117.00 60.00 0.87 100.0 C19orf48P-218 lncRNA upper lobe of left lung (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 4801.00 64.48 35.51 90.01 SNHG18-220 lncRNA upper lobe of left lung (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 260.00 16.53 1.92 100.0 ENST00000817026 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 4.00 0.08 0.03 100.0 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 164.89 3.48 1.22 35.92 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 80.48 1.70 0.60 59.62 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 388.09 8.20 2.87 64.25 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 112.65 2.38 0.83 23.13 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 80.00 1.69 0.59 88.89 ENST00000823279 lncRNA upper lobe of left lung (Tissue)