ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 216.00 0.11 1.60 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 111880.00 57.70 827.62 99.83 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 2641.00 1.36 19.54 74.5 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 170.00 0.09 1.26 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 700.00 0.36 5.18 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 53741.00 27.71 397.54 98.35 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 2472.00 1.27 18.29 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 573.00 0.30 4.24 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 404.00 0.21 2.99 52.54 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 78.00 0.04 0.58 50.65 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 6574.00 3.39 48.63 81.31 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 9997.00 77.14 73.95 85.97 MIR3142HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 50274.00 81.31 371.90 90.22 MIR151A-201 miRNA upper lobe of left lung (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 5051.00 8.17 37.36 100.0 MIR151A-201 miRNA upper lobe of left lung (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 763.00 98.07 5.64 100.0 DENND3-221 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 1586.00 2.71 11.73 100.0 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 1636.00 2.80 12.10 62.16 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 199.00 0.34 1.47 100.0 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 1777.00 3.04 13.15 100.0 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 7414.00 12.67 54.84 74.85 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 996.00 1.70 7.37 37.84 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 197.00 20.14 1.46 100.0 SCARNA9-201 lncRNA upper lobe of left lung (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 67001.00 96.40 495.63 100.0 TAF1D-215 retained intron upper lobe of left lung (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 8.00 0.96 0.06 100.0 HSPA8-215 retained intron upper lobe of left lung (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 457616.00 72.24 3385.16 74.31 ENST00000548801 lncRNA upper lobe of left lung (Tissue)