ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 9.00 81.82 0.07 100.0 MIR450B-201 miRNA upper lobe of left lung (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 48.00 31.79 0.36 100.0 MIR887-201 miRNA upper lobe of left lung (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 15.00 100.00 0.11 100.0 MIR889-201 miRNA upper lobe of left lung (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 39.00 88.64 0.29 100.0 MIR548K-201 miRNA upper lobe of left lung (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 425.00 57.59 3.14 100.0 MIR320B2-201 miRNA upper lobe of left lung (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 7.00 87.50 0.05 100.0 MIR1271-201 miRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 1349.00 4.44 9.98 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 331.00 1.09 2.45 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 24277.00 79.81 179.59 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2304.00 7.57 17.04 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3763.00 70.55 27.84 100.0 SNORD111B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 252.00 1.18 1.86 100.0 RNU2-36P-201 snRNA upper lobe of left lung (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 817.00 3.81 6.04 100.0 RNU2-36P-201 snRNA upper lobe of left lung (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 1553.00 2.21 11.49 100.0 SNORD19C-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 66731.00 94.87 493.64 98.68 SNORD19C-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2260.00 71.97 16.72 100.0 SNORD12B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 263.00 8.38 1.95 100.0 SNORD12B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 12.00 2.56 0.09 100.0 Y_RNA.609-201 misc RNA upper lobe of left lung (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 50.00 34.72 0.37 100.0 Y_RNA.612-201 misc RNA upper lobe of left lung (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 472.00 17.40 3.49 100.0 SNORD71-201 snoRNA upper lobe of left lung (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 460.00 16.96 3.40 100.0 SNORD71-201 snoRNA upper lobe of left lung (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 8743.00 89.31 64.68 96.32 MIR194-2HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 950.00 9.70 7.03 44.58 MIR194-2HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 20.00 76.92 0.15 100.0 RPS7P15-201 processed pseudogene upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 1026.00 17.60 7.59 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)