ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 247.00 85.76 1.15 100.0 MIR30C1-201 miRNA sigmoid colon (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 20.00 90.91 0.09 100.0 MIR660-201 miRNA sigmoid colon (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 138.00 7.91 0.64 100.0 MIR125B1-201 miRNA sigmoid colon (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 1122.00 64.30 5.23 80.14 MIR125B1-201 miRNA sigmoid colon (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 1.00 16.67 0.00 100.0 MIR493-201 miRNA sigmoid colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 88.57 57.15 0.41 61.09 MIR182-201 miRNA sigmoid colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 51.61 33.30 0.24 35.35 MIR182-201 miRNA sigmoid colon (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 1599.00 81.50 7.45 85.74 MIR100-201 miRNA sigmoid colon (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 40.00 90.91 0.19 100.0 MIR301A-201 miRNA sigmoid colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 676.00 86.56 3.15 95.75 MIR130A-201 miRNA sigmoid colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 101.00 12.93 0.47 61.21 MIR130A-201 miRNA sigmoid colon (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 24953.00 96.85 116.22 98.05 MIRLET7F2-201 miRNA sigmoid colon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 21.00 80.77 0.10 100.0 MIR652-201 miRNA sigmoid colon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 416.00 84.21 1.94 100.0 MIR140-201 miRNA sigmoid colon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 10.00 23.81 0.05 83.33 MIR106B-201 miRNA sigmoid colon (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 1.00 2.38 0.00 100.0 MIR106B-201 miRNA sigmoid colon (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 84.00 50.30 0.39 100.0 SNORD41-201 snoRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 38.00 7.60 0.18 52.78 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 33.00 6.60 0.15 100.0 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 58.00 11.60 0.27 63.04 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 97.00 13.00 0.45 100.0 MT-TV-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 2.00 0.05 0.01 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 150.00 4.09 0.70 79.79 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 50.00 1.36 0.23 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 8.00 0.22 0.04 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)