ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 31.00 55.36 0.14 100.0 MIR218-1-201 miRNA sigmoid colon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 691.00 89.51 3.22 95.57 MIR181B2-201 miRNA sigmoid colon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 367108.00 90.63 1709.82 91.16 MIR10B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 8.37 59.81 0.04 64.41 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 6.11 43.62 0.03 55.51 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 1.00 7.14 0.00 100.0 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 680.00 34.45 3.17 100.0 MIR199A1-201 miRNA sigmoid colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 26.68 22.61 0.12 28.09 MIR93-201 miRNA sigmoid colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 73.60 62.37 0.34 71.46 MIR93-201 miRNA sigmoid colon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 80.00 72.73 0.37 86.96 MIR532-201 miRNA sigmoid colon (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 17.00 100.00 0.08 100.0 MIR15B-201 miRNA sigmoid colon (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 50.00 87.72 0.23 100.0 MIR150-201 miRNA sigmoid colon (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 8.00 80.00 0.04 100.0 MIR542-201 miRNA sigmoid colon (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 20.00 48.78 0.09 100.0 MIR500A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 2242.00 26.30 10.44 90.51 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 5372.00 63.02 25.02 95.81 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 443.00 5.20 2.06 100.0 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 145.00 1.70 0.68 100.0 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 19386.00 92.76 90.29 95.18 MIR27B-201 miRNA sigmoid colon (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 202.00 0.97 0.94 100.0 MIR27B-201 miRNA sigmoid colon (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 8.00 88.89 0.04 100.0 MIR196A2-201 miRNA sigmoid colon (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 24.00 88.89 0.11 88.89 MIR654-201 miRNA sigmoid colon (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 63.00 100.00 0.29 100.0 MIR204-201 miRNA sigmoid colon (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 287.00 94.41 1.34 100.0 MIR152-201 miRNA sigmoid colon (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 1.00 100.00 0.00 100.0 MIR138-1-201 miRNA sigmoid colon (Tissue)