ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 2213.54 4.25 10.31 48.25 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 2800.00 5.37 13.04 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 338.00 0.65 1.57 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 598.00 63.48 2.79 100.0 SNORD114-9-201 snoRNA sigmoid colon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 208.00 22.08 0.97 100.0 SNORD114-9-201 snoRNA sigmoid colon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1244.00 16.85 5.79 100.0 Y_RNA.234-201 misc RNA sigmoid colon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 161.00 4.91 0.75 100.0 RNA5SP141-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 97.00 57.74 0.45 100.0 SNORD114-15-201 snoRNA sigmoid colon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 14.00 25.00 0.07 100.0 ENST00000364722 snoRNA sigmoid colon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 18.00 51.43 0.08 100.0 SNORD113-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 319.00 73.33 1.49 100.0 SNORD52-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 384.00 67.25 1.79 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 98.00 17.16 0.46 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 14.00 1.80 0.07 100.0 RNA5SP298-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 79.00 66.95 0.37 100.0 SNORD113-9-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 3706.00 83.83 17.26 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 278.00 6.29 1.29 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 37.00 0.84 0.17 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1043.00 87.35 4.86 96.84 SNORD114-20-201 snoRNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 72.00 2.59 0.34 77.42 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 237.00 8.54 1.10 17.48 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 26.00 0.94 0.12 100.0 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 85.00 3.06 0.40 80.19 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 27.00 0.97 0.13 47.37 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 900.00 90.36 4.19 100.0 RNA5SP77-201 rRNA pseudogene sigmoid colon (Tissue)