ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 202.00 3.62 0.94 100.0 SNORD104-201 snoRNA sigmoid colon (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 17.00 0.30 0.08 100.0 SNORD104-201 snoRNA sigmoid colon (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 15949.00 62.97 74.28 71.93 RNA5SP358-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 37.00 0.98 0.17 72.55 RNA5SP145-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 51.00 46.79 0.24 100.0 Y_RNA.105-201 misc RNA sigmoid colon (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 77.00 15.88 0.36 100.0 RNY4P9-201 misc RNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 19.00 1.77 0.09 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 212.00 19.70 0.99 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 111.00 10.32 0.52 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 34.00 1.89 0.16 62.96 RNY4P27-201 misc RNA sigmoid colon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 425.00 23.64 1.98 95.51 RNY4P27-201 misc RNA sigmoid colon (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 185.00 17.37 0.86 100.0 Y_RNA.136-201 misc RNA sigmoid colon (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 978.00 92.79 4.56 98.79 SNORD114-25-201 snoRNA sigmoid colon (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 328.00 95.91 1.53 100.0 SNORD113-7-201 snoRNA sigmoid colon (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 31.00 21.53 0.14 100.0 Y_RNA.181-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1303.00 19.69 6.07 100.0 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 2966.80 44.82 13.82 79.56 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 150.41 2.27 0.70 5.44 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 64.00 0.97 0.30 100.0 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 2213.54 4.25 10.31 48.25 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 2800.00 5.37 13.04 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 338.00 0.65 1.57 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 506.00 0.97 2.36 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1461.64 2.80 6.81 40.29 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 68.00 0.13 0.32 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)