ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1.00 0.16 0.00 100.0 ZFAS1-238 lncRNA sigmoid colon (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 10.00 1.61 0.05 100.0 ZFAS1-238 lncRNA sigmoid colon (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 264.00 42.44 1.23 100.0 ZFAS1-238 lncRNA sigmoid colon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 557.00 92.07 2.59 100.0 ZFAS1-242 lncRNA sigmoid colon (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 92.00 2.82 0.43 100.0 ENST00000837997 lncRNA sigmoid colon (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 2401.00 73.54 11.18 100.0 ENST00000837997 lncRNA sigmoid colon (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 1597.00 75.69 7.44 80.86 ENST00000839036 lncRNA sigmoid colon (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 23.00 11.22 0.11 100.0 ENST00000849527 lncRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 1023961.00 94.91 4769.14 97.39 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 26.00 0.00 0.12 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1041.00 22.90 4.85 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 2999.00 65.97 13.97 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 4.00 1.30 0.02 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 23.00 0.82 0.11 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 14615.00 46.66 68.07 60.99 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 70.00 0.00 0.33 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 164.00 60.97 0.76 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 11680.00 37.63 54.40 88.86 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 326.00 1.05 1.52 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 825.00 32.37 3.84 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 42.00 0.00 0.20 63.64 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 16.00 0.00 0.07 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 206.00 0.00 0.96 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 18.00 0.00 0.08 81.82 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 1650738.00 28.26 7688.38 51.75 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)