ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 44223.00 51.59 205.97 99.55 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 42.00 0.05 0.20 55.26 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 4299.00 5.02 20.02 99.68 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 497.00 0.58 2.31 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 8344.00 9.73 38.86 99.93 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 150.00 0.17 0.70 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 2.00 0.00 0.01 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 60.00 0.07 0.28 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 93.00 0.11 0.43 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 45.00 0.05 0.21 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 8535.00 9.96 39.75 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 5.00 0.01 0.02 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 160.00 0.19 0.75 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 380.00 0.44 1.77 88.58 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 13.00 0.02 0.06 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 1152.00 1.34 5.37 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 235.00 0.27 1.09 90.73 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 146.93 0.17 0.68 32.58 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 69.00 0.08 0.32 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 177.00 0.21 0.82 51.75 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 59.00 0.07 0.27 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 67.00 0.08 0.31 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 126.00 3.95 0.59 100.0 SNHG5-273 lncRNA sigmoid colon (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 381.00 11.95 1.77 100.0 SNHG5-273 lncRNA sigmoid colon (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 38.30 1.20 0.18 91.18 SNHG5-273 lncRNA sigmoid colon (Tissue)