ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 1343.00 41.77 6.26 87.84 ENST00000655317 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2026.00 0.40 9.44 77.27 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 498474.00 98.72 2321.66 100.0 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 419.00 0.08 1.95 100.0 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 1080.00 87.80 5.03 100.0 MEG8-228 lncRNA sigmoid colon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 237.00 4.32 1.10 100.0 LIMD1-AS1-204 lncRNA sigmoid colon (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1181.00 21.55 5.50 98.33 LIMD1-AS1-204 lncRNA sigmoid colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 1122.00 62.16 5.23 80.14 MIR99AHG-262 lncRNA sigmoid colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 188.00 10.42 0.88 100.0 MIR99AHG-262 lncRNA sigmoid colon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 59.00 58.42 0.27 95.16 MIR9-2HG-225 lncRNA sigmoid colon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 34.00 20.61 0.16 100.0 MEG8-233 lncRNA sigmoid colon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 47.00 28.48 0.22 100.0 MEG8-233 lncRNA sigmoid colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 64.00 18.08 0.30 100.0 MEG8-234 lncRNA sigmoid colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 144.00 40.68 0.67 100.0 MEG8-234 lncRNA sigmoid colon (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 37.00 55.22 0.17 100.0 MEG8-240 lncRNA sigmoid colon (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 2.00 11.76 0.01 100.0 SNHG14-306 lncRNA sigmoid colon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 154.00 70.32 0.72 100.0 MEG8-242 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 8824.00 97.46 41.10 99.37 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 34.00 0.38 0.16 100.0 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 23.00 0.25 0.11 100.0 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 7586.00 8.85 35.33 78.17 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 89.00 0.10 0.41 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 941.00 1.10 4.38 98.84 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 287.06 0.33 1.34 63.65 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 357.00 0.42 1.66 86.23 SNHG1-248 lncRNA sigmoid colon (Tissue)