ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 14207.00 4.99 83.22 91.09 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 453.00 16.57 2.65 78.51 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 1998.00 95.37 11.70 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 26.00 4.28 0.15 89.66 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 37.00 88.10 0.22 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 1374.00 6.28 8.05 96.69 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 47.00 0.21 0.28 3.31 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 4154.00 18.98 24.33 82.57 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 378.14 10.57 2.21 35.05 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 780.71 21.83 4.57 68.91 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 283.00 7.91 1.66 80.86 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 62546.00 95.28 366.35 98.34 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 201.00 3.37 1.18 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1627.00 19.66 9.53 61.28 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 308.00 0.21 1.80 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 989.00 0.34 5.79 72.88 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 557.00 34.90 3.26 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 92.00 1.42 0.54 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 147974.00 96.83 866.73 99.86 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 4.00 0.03 0.02 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 1023.00 8.21 5.99 69.83 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 73.00 14.40 0.43 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 17.00 1.16 0.10 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 84.00 3.97 0.49 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 3764.00 85.24 22.05 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA sigmoid colon (Tissue)